CDE Detailed Report

Disease: Unruptured Cerebral Aneurysms and Subarachnoid Hemorrhage
Sub-Domain: [php]
CRF: Biospecimen Collection and Processing

Displaying 1 - 44 of 44
CDE ID CDE Name Variable Name Definition Short Description Additional Notes (Question Text) Permissible Values Description Data Type Disease Specific Instructions Disease Specific Reference Population Classification (e.g., Core) Version Number Version Date CRF Name (CRF Module / Guideline) Sub Domain Name Domain Name Size Input Restrictions Min Value Max Value Measurement Type External Id Loinc External Id Snomed External Id caDSR External Id CDISC
C54751 Cerebrospinal fluid collection anatomic site CSFCollectAnatSite The anatomic site related to collection of cerebrospinal fluid (CSF). The anatomic site related to collection of cerebrospinal fluid (CSF). Site of CSF acquisition Ventricular cistern;Lumbar cistern;Other, specify Ventricular cistern;Lumbar cistern;Other, specify Alphanumeric Adult;Pediatric Core 1.00 2017-04-11 12:19:20.0 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C55362 Multiplex platform normalization technique text MultiplxPlatNormTechTxt Free-text field to describe normalization techniques for multiplex platforms Free-text field to describe normalization techniques for multiplex platforms Normalization techniques: Alphanumeric

For multiplex platforms (proteomics, metabolomics, luminex assays)

Adult;Pediatric Exploratory 3.00 2013-07-16 14:01:43.01 Biospecimen Collection and Processing [php] [php_1] 255

Free-Form Entry

C55323 Specimen normal control collected indicator SpcmnNrmlCtrlCollectInd Indicator of whether or not normal or control samples were collected Indicator of whether or not normal or control samples were collected Normal/control samples collected: No;Yes;Unknown No;Yes;Unknown Alphanumeric Adult;Pediatric Supplemental 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C55347 Microdialysis cerebral probe membrane length measuremement MicrodiaCrbrlPrbMembLengtMeasr The field to specify the membrane length for probes used for cerebral microdialysis specimens The field to specify the membrane length for probes used for cerebral microdialysis specimens Membrane length: Numeric Values

For cerebral microdialysis specimens

Adult;Pediatric Supplemental 3.00 2013-06-21 00:00:00.0 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

C54752 Cerebrospinal fluid collection anatomic site other text CSFCollectAnatSiteOTH The free-text field related to other anatomic site related to collection of cerebrospinal fluid (CSF). The free-text field related to other anatomic site related to collection of cerebrospinal fluid (CSF). Specify Alphanumeric Adult;Pediatric Core 1.00 2017-04-11 12:19:20.0 Biospecimen Collection and Processing [php] [php_1] 255

Free-Form Entry

C55363 Multiplex platform batch effect indicator MultiplxPlatBatchEffInd Indicator for whether there was batch effect for multiplex platforms Indicator for whether there was batch effect for multiplex platforms Presence of batch-effect? No;Yes No;Yes Alphanumeric

For multiplex platforms (proteomics, metabolomics, luminex assays)

Adult;Pediatric Exploratory 3.00 2013-07-16 14:01:43.01 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C55325 Specimen convalescent collected indicator SpcmnConvalesCollectInd Indicator of whether or not convalescent samples were collected Indicator of whether or not convalescent samples were collected Convalescent samples collected: No;Yes;Unknown No;Yes;Unknown Alphanumeric Adult;Pediatric Supplemental 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C55348 Device model number DevModelNum The model number for the device used The model number for the device used Model #: Numeric Values

For cerebral microdialysis specimens

Adult;Pediatric Supplemental 3.00 2013-08-28 16:08:00.453 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

C54753 Specimen collection tube type SpecimenCollectionTubTyp Type of tube used for specimen collection. Type of tube used for specimen collection. Type of collection tubes used Other, specify;Polystyrene tubes;Polypropylene tubes;Coated in EDTA;Coated with citrate;Coated with heparin;No coating Other, specify;Polystyrene tubes;Polypropylene tubes;Coated in EDTA;Coated with citrate;Coated with heparin;No coating Alphanumeric Adult;Pediatric Core 1.00 2017-04-11 12:19:20.0 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C55746 Specimen surround dry ice shipment indicator SpcmnSurrndDryIceShipInd The indicator related to whether the specimen was surrounded by dry ice for shipping The indicator related to whether the specimen was surrounded by dry ice for shipping Samples surrounded by dry ice to maintain temperature -80C or below throughout shipment: No;Yes No;Yes Alphanumeric Adult;Pediatric Supplemental 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C55327 Specimen serial collected indicator SampleSerialCollectInd Indicator of whether or not serial samples were collected over time Indicator of whether or not serial samples were collected over time Serial specimens collected (over time): No;Yes;Unknown No;Yes;Unknown Alphanumeric Adult;Pediatric Supplemental 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C01701 Lab specimen collection date and time LabSpecmnCollDateTime Date (and time if applicable and known) when the specimen was collected Date (and time if applicable and known) when the specimen was collected Date of sample collection Date or Date & Time

Relative to disease/event onset

Adult;Pediatric Core 3.00 2013-07-25 08:54:08.2 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

2004004
C55349 Microdialysis cerebral Ictus monitoring interval MicrodCrbrlIctusMonitorIntrvl The period of time elapsed between ictus and monitoring for cerebral microdialysis The period of time elapsed between ictus and monitoring for cerebral microdialysis Time from ictus to monitoring: Numeric Values

For cerebral microdialysis specimens

Adult;Pediatric Supplemental 1.00 2017-04-12 17:44:54.0 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

C54754 Specimen collection tube other text SpecimenCollectionTubOTH The free-text field related to other tube for specimen collection. The free-text field related to other tube for specimen collection. Specify Alphanumeric Adult;Pediatric Core 1.00 2017-04-11 12:19:20.0 Biospecimen Collection and Processing [php] [php_1] 255

Free-Form Entry

C55747 Specimen insulate shipment box indicator SpcmnInsulateShipBoxInd The indicator related to whether the specimen insulated in a shipment box The indicator related to whether the specimen insulated in a shipment box Use insulated bio-shipment box: No;Yes No;Yes Alphanumeric Adult;Pediatric Supplemental 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C55329 Specimen storage barcode system used indicator SpecStrgBarcdSysUsedInd The indicator related to whether a specimen storage barcode system was used The indicator related to whether a specimen storage barcode system was used Samples torage bar code system (automated date/time) method used: No;Yes;Unknown No;Yes;Unknown Alphanumeric Adult;Pediatric Supplemental 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C14517 Device manufacturer name DevManufName The company responsible for development of the device The name of the manufacturer of the device that was placed in the subject's body Manufacturer: Alphanumeric

For cerebral microdialysis specimens

Adult;Pediatric Supplemental 3.00 2013-08-28 16:08:00.453 Biospecimen Collection and Processing [php] [php_1] 255

Free-Form Entry

C55352 Microdialysate source type MicrodiaSourcTyp The free-text field to specify the type of microdialysate specimen source The free-text field to specify the type of microdialysate specimen source Composition and source of the microdialysate: Alphanumeric

For cerebral microdialysis specimens

Adult;Pediatric Supplemental 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing [php] [php_1] 255

Free-Form Entry

C55003 Specimen centrifugation revolutions per minute value SpecCentrifugationRPMVal The value related to revoluntions per minute in a centrifuge. The value related to revoluntions per minute in a centrifuge. RPM Numeric Values Adult;Pediatric Core 1.00 2017-04-17 14:55:46.0 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

C55338 Specimen freeze thaw cycle prior biomarker assay number SpcmnFrzThwCycPriorBiomAssaNum The number of freeze thaw cycles the sample underwent prior to the biomarker assay The number of freeze thaw cycles the sample underwent prior to the biomarker assay Number of freeze/thaw cycles the sample went through prior to biomarker assay: Numeric Values Adult;Pediatric Supplemental 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

C54743 Specimen biologic source type SpecmnBioSourcTyp The type of biologic specimen collection source. The type of biologic specimen collection source. Sample source Biological tissue;Biological fluid;Unknown Biological tissue;Biological fluid;Unknown Alphanumeric Adult;Pediatric Core 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C55353 Microdialysate composition type text MicrodiaCompTypTxt The free-text field to specify the composition of microdialysate specimen The free-text field to specify the composition of microdialysate specimen Composition and source of the microdialysate: Alphanumeric

For cerebral microdialysis specimens

Adult;Pediatric Supplemental 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing [php] [php_1] 500

Free-Form Entry

C55004 Specimen centrifugation temperature value SpecCentrifugationTempVal The value related to temperature in a centrifuge. The value related to temperature in a centrifuge. Temperature Numeric Values Adult;Pediatric Core 1.00 2017-04-17 14:55:46.0 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

degrees celsius
C55340 Specimen selective inhibitor used indicator SpcmnSelecvInhibitUsedInd Indicator of whether or not selective inhibitors were used on the sample Indicator of whether or not selective inhibitors were used on the sample Selective inhibitors used (depending on target analyte): No;Yes No;Yes Alphanumeric Adult;Pediatric Supplemental 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C54746 Specimen not collected reason SpecmnNotCollectRsn The reason the specimen sample was excluded. The reason the specimen sample was excluded. Reason(s) sample excluded Nervous system neoplasm;Nervous system infection;Target organ infection;Paraneoplastic conditions;Demyelinated conditions;Inflammatory conditions;Malignancy;Liver failure;Renal failure Nervous system neoplasm;Nervous system infection;Target organ infection;Paraneoplastic conditions;Demyelinated conditions;Inflammatory conditions;Malignancy;Liver failure;Renal failure Alphanumeric

Certain conditions may alter biomarker composition and inclusion/exclusion should be carefully considered

Adult;Pediatric Core 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing [php] [php_1]

Multiple Pre-Defined Values Selected

C55357 Microdialysis cerebral analyte glucose measurement MicrodiaCrbrlAnalytGluMeasr The value of glucose in in the cerebral microdialysis analyte The value of glucose in in the cerebral microdialysis analyte Glucose: Numeric Values

For cerebral microdialysis specimens
mmol/l

Adult;Pediatric Supplemental 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

C55005 Specimen centrifugation duration SpecCentrifugationDur The duration related to centrifugation. The duration related to centrifugation. Duration Numeric Values Adult;Pediatric Core 1.00 2017-04-17 14:55:46.0 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

second
C55341 Specimen selective inihbitor used type SpcmnSelecvInhibitUsedTyp The type of selective inhibitors that were used on the sample The type of selective inhibitors that were used on the sample If YES Protease inhibitor;Rnase inhibitor;Unknown Protease inhibitor;Rnase inhibitor;Unknown Alphanumeric Adult;Pediatric Supplemental 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C54747 Specimen acquisition anatomical site SpecmnAcquisAnatSite The anatomical site related to the site of blood, serum or plasma samples. The anatomical site related to the site of blood, serum or plasma samples. Site of sample acquisition (blood/serum/plasma samples) Arterial blood source;Venous blood source;Peripheral venipucture;Vascular access;Unknown Arterial blood source;Venous blood source;Peripheral venipucture;Vascular access;Unknown Alphanumeric

Vascular access includes arterial or central venous catheters

Adult;Pediatric Core 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing [php] [php_1]

Multiple Pre-Defined Values Selected

C55358 Microdialysis cerebral analyte pyruvate measurement MicrodiaCrbrlAnalytPyruMeasr The value of pyruvate in in the cerebral microdialysis analyte The value of pyruvate in in the cerebral microdialysis analyte Pyruvate: Numeric Values

For cerebral microdialysis specimens
mmol/l

Adult;Pediatric Supplemental 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

C55006 Specimen time collection process interval SpecTimeCollProcIntrvl The interval from the specimen collection and initial processing. The interval from the specimen collection and initial processing. Time lapse between sample collection and initial processing Numeric Values Adult;Pediatric Core 1.00 2017-04-17 15:05:54.0 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

minute
C55343 Specimen hazardous triple packaged ship indicator SpcmnHzrdTrplPackShipInd The indicator related to whether the hazardous specimen was triple packaged for shipping The indicator related to whether the hazardous specimen was triple packaged for shipping Potentially hazardous biological materials are triple packaged to withstand leakage, shocks, temperature and pressure changes that occur during handling and transportation: No;Yes No;Yes Alphanumeric Adult;Pediatric Supplemental 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C54748 Specimen baseline collection indicator SpecmnBaselineCollectInd The indicator related to baseline specimen being collected. The indicator related to baseline specimen being collected. Baseline specimen collected No;Yes;Unknown No;Yes;Unknown Alphanumeric

Collected within 12 hours of initial hospital presentation

Adult;Pediatric Core 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C55359 Microdialysis cerebral analyte lactate measurement MicrodiaCrbrlAnalytLactMeasr The value of lactate in in the cerebral microdialysis analyte The value of lactate in in the cerebral microdialysis analyte Lactate: Numeric Values

For cerebral microdialysis specimens
mmol/l

Adult;Pediatric Supplemental 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

C55007 Biospecimen collection other text BiospecCollOTH The free-text field related to other type of biospecimen collection The free-text field related to other type of biospecimen collection Other, specify Alphanumeric Adult;Pediatric Core 1.00 2017-04-17 15:09:42.0 Biospecimen Collection and Processing [php] [php_1] 255

Free-Form Entry

C55344 Microdialysis cerebral probe location anatomic site MicrodiaCrbrlPrbAnatSite Free-text field to describe the location of the probe for cerebral microdialysis specimens Free-text field to describe the location of the probe for cerebral microdialysis specimens Location of probe placement: Alphanumeric

For cerebral microdialysis specimens

Adult;Pediatric Supplemental 3.00 2013-06-21 00:00:00.0 Biospecimen Collection and Processing [php] [php_1] 255

Free-Form Entry

C54749 Cerebrospinal fluid collection method type CSFCollectMethoTyp The method related to cerebrospinal fluid (CSF) being collected. The method related to cerebrospinal fluid (CSF) being collected. Method of CSF acquisition Collection catheter;Lumbar Puncture;Other, specify Collection catheter;Lumbar Puncture;Other, specify Alphanumeric

Collection catheters include external ventricular and lumbar drain catheters. Other mehods can include VP shunt tap.

Adult;Pediatric Core 1.00 2017-04-11 12:19:20.0 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C55360 Microdialysis cerebral analyte lactate pyruvate ratio value MicrdiaCrbrlAnlytLactPyrRatVal The ratio of lactate to pyruvate in the cerebral microdialysis analyte The ratio of lactate to pyruvate in the cerebral microdialysis analyte L/P ratio: Numeric Values

For cerebral microdialysis specimens

Adult;Pediatric Supplemental 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

C55008 Biospecimen collection type BioSpecCollectTyp The type related to biospecimen collection The type related to biospecimen collection Type of sample stored Plasma;Serum;Buffy coat;Other, specify Plasma;Serum;Buffy coat;Other, specify Alphanumeric Adult;Pediatric Core 1.00 2017-04-17 15:12:20.0 Biospecimen Collection and Processing [php] [php_1]

Multiple Pre-Defined Values Selected

C55345 Microdialysis cerebral probe number MicrodiaCrbrlPrbNum The number of probes used for cerebral microdialysis specimens The number of probes used for cerebral microdialysis specimens Number of probes: Numeric Values

For cerebral microdialysis specimens

Adult;Pediatric Supplemental 3.00 2013-06-21 00:00:00.0 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

C54750 Cerebrospinal fluid collection method other text CSFCollectMethoOTH The free-text field related to other for method related to cerebrospinal fluid (CSF) being collected. The free-text field related to other for method related to cerebrospinal fluid (CSF) being collected. Specify Alphanumeric Adult;Pediatric Core 1.00 2017-04-11 12:19:20.0 Biospecimen Collection and Processing [php] [php_1] 255

Free-Form Entry

C55361 Microdialysis cerebral novel target analyte indicator MicrdiaCrbrlNovlTargAnalytInd The indicator related to whether there were any novel target analytes in the cerebral microdialysis The indicator related to whether there were any novel target analytes in the cerebral microdialysis Any novel target analytes? No;Yes No;Yes Alphanumeric

For cerebral microdialysis specimens

Adult;Pediatric Supplemental 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing [php] [php_1]

Single Pre-Defined Value Selected

C55009 Specimen storage temperature value SpecStorTempVal The temperature value for the specimen being stored. The temperature value for the specimen being stored. Sample storage temperature Numeric Values Adult;Pediatric Core 1.00 2017-04-17 15:19:20.0 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

degrees celsius
C55346 Microdialysis cerebral probe molecular weight limit value MicrodiaCrbrlPrbMolWtLimVal The field to specify the molecular weight limit for probes used for cerebral microdialysis specimens The field to specify the molecular weight limit for probes used for cerebral microdialysis specimens Probe molecular weight cut-off: Numeric Values

For cerebral microdialysis specimens

Adult;Pediatric Supplemental 3.00 2013-06-21 00:00:00.0 Biospecimen Collection and Processing [php] [php_1]

Free-Form Entry

CSV