CDE Detailed Report

Disease: system
Subdomain Name: Laboratory Tests and Biospecimens/Biomarkers
CRF: files

Displaying 151 - 166 of 166
CDE ID CDE Name Variable Name Definition Short Description Question Text Permissible Values Description Data Type Disease Specific Instructions Disease Specific Reference Population Classification (e.g., Core) Version Number Version Date CRF Name (CRF Module / Guidance) Subdomain Name Domain Name Size Input Restrictions Min Value Max Value Measurement Type External Id Loinc External Id Snomed External Id caDSR External Id CDISC
C19981 Immunohistochemistry CD20 presence status IHCCD20PresStat The status of the presence of CD20 in immunohistochemistry The status of the presence of CD20 in immunohistochemistry CD20 Absent;Present Absent;Present Alphanumeric

If present; specify the percent of lymphocytes

 Adult;Pediatric Supplemental 1.00 2015-02-09 00:00:00.0 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected
C19917 Biopsy and autopsy cytochrome oxidate negative fibers status BpApCOXNegFibStat Cytochrome oxidate (COX) negative fibers status in biopsy Cytochrome oxidate (COX) negative fibers status in biopsy COX-negative fibers Absent;Sparse;Moderate Absent;Sparse;Moderate Alphanumeric Adult;Pediatric Supplemental 1.00 2015-02-09 00:00:00.0 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected
C12247 Biopsy and Autopsy tissue collection method type BpApTissCollMethdTyp The type of method used for collection of the tissue specimen The type of method used for collection of the tissue specimen Biopsy method Punch biopsy;Blister biopsy;Open biopsy;Open;Needle Punch biopsy;Blister biopsy;Open biopsy;Open;Needle Alphanumeric

No instructions available

 No references available Adult;Pediatric Supplemental 3.00 2013-07-24 11:38:01.2 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected
C19949 Biopsy and autopsy additional observation text BpApAdditionObservText The free-text field for recording additional observations about the biopsy or autopsy being performed The free-text field for recording additional observations about the biopsy or autopsy being performe Additional observations Alphanumeric Adult;Pediatric Supplemental 1.00 2015-02-09 00:00:00.0 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 4000

Free-Form Entry
C17904 Biopsy and autopsy pathological inclusions text BpApPathlgyInclTxt Text describing pathological inclusions (if any) Indicator of pathological inclusions (if any) Describe any pathological inclusions noted Alphanumeric

No instructions available

 No references available Adult;Pediatric Supplemental 3.00 2013-07-24 11:38:01.2 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry
C19896 Elevated erythrocyte sedimentation rate indicator ElevatErythSedimRateInd Indicator of whether participant/subject experienced elevated erythrocyte sedimentation rate Indicator of whether participant/subject experienced elevated erythrocyte sedimentation rate Elevated erythrocyte sedimentation rate (ESR) No;Yes;Unknown No;Yes;Unknown Alphanumeric

No instructions available

 No references available Adult;Pediatric Supplemental 1.00 2015-02-09 00:00:00.0 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected
C19992 Immunohistochemistry desmin aggregate level status IHCDesminAggregLvlStat Level of desmin aggregate Level of desmin aggregate Desmin Normal;Increased Normal;Increased Alphanumeric Adult;Pediatric Supplemental 1.00 2015-02-09 00:00:00.0 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected
C20327 Biopsy autopsy excessive intracellular lipid status BpApExessIntraceLipidStat The status related to excessive intracellular lipid storage pathology which involves excess Oil Red O+ material that is easily identifiable on light microscopy and is evident on other stains including H and E The status related to excessive intracellular lipid storage pathology which involves excess Oil Red O+ material that is easily identifiable on light microscopy and is evident on other stains including H and Excessive intracellular lipid Absent;Mild;Marked Absent;Mild;Marked Alphanumeric Adult;Pediatric Supplemental 1.00 2015-02-18 08:54:08.0 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected
C19928 Biopsy and autopsy moth eaten fibers status BpApMothEatFibStat Moth-eaten fibers status in biopsy/autopsy Moth-eaten fibers status in biopsy/autopsy Moth-eaten fibers Absent;Sparse Absent;Sparse Alphanumeric Adult;Pediatric Supplemental 1.00 2015-02-09 00:00:00.0 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected
C12262 Biopsy and autopsy microorganisms name BpApMicroorgName Name of microorganisms identified in biopsy or autopsy specimen Name of microorganisms identified in biopsy or autopsy specimen Microorganisms identified, specify which Alphanumeric

Only answered if "Microorganisms identified" is answered for "Inflammation"

 No references available Adult;Pediatric Supplemental 3.00 2013-07-24 11:38:01.2 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry
C19960 Immunohistochemistry laminin alpha2 merosin 300 status IHCLaminAlp2Meros300Stat The status of Laminin a2/Merosin (300 kDa) in immunohistochemistry The status of Laminin a2/Merosin (300 kDa) in immunohistochemistry Laminin a2/Merosin (300 kDa) Absent;Reduced;Normal Absent;Reduced;Normal Alphanumeric Adult;Pediatric Supplemental 1.00 2015-02-09 00:00:00.0 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected
C19907 Hypertrophic fibers presence status HyperFibPresStat Presence of hypertrophic fiber Presence of hypertrophic fiber Hypertrophic fibers Absent;Present Absent;Present Alphanumeric Adult;Pediatric Supplemental 1.00 2015-02-09 00:00:00.0 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected
C12232 Laboratory director name LabDirectorName Name of laboratory director where assessment was performed Name of laboratory director where assessment was performed Name of laboratory director Alphanumeric

No instructions available

 No references available Adult;Pediatric Supplemental 3.00 2013-07-24 11:38:01.2 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry
C19939 Biopsy and autopsy fiber abnormality status BpApAbnrmlyFibStat Presence or absence of fiber abnormalities on a muscle biopsy Presence or absence of fiber abnormalities on a muscle biopsy Abnormalities of fiber type Absent;Present Absent;Present Alphanumeric

Only answered if "Abnormalities of fiber type" is answered for "Which of the following diagnostic abnormalities were noted on histochemical stains?"

 No references available Adult;Pediatric Supplemental 1.00 2015-02-09 00:00:00.0 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected
C12525 Biopsy and autopsy fiber abnormality type BpApAbnrmlyFibTyp Fiber type abnormalities on a muscle biopsy Fiber type abnormalities on a muscle biopsy Specify Type 1 predominance;Type 2 predominance;Fiber type grouping Type 1 predominance;Type 2 predominance;Fiber type grouping Alphanumeric

Only answered if "Abnormalities of fiber type" is answered for "Which of the following diagnostic abnormalities were noted on histochemical stains?"

 No references available Adult;Pediatric Supplemental 3.00 2013-07-24 11:38:01.2 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected
C19971 Immunohistochemistry caveolin 3 status IHCCaveolin3Stat The status of caveolin 3 in immunohistochemistry The status of caveolin 3 in immunohistochemistry Caveolin 3 Absent;Reduced;Normal Absent;Reduced;Normal Alphanumeric Adult;Pediatric Supplemental 1.00 2015-02-09 00:00:00.0 Muscle Biopsies and Autopsy Tissue Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected
CSV