CDE Detailed Report

Disease: Stroke
Sub-Domain: Laboratory Tests and Biospecimens/Biomarkers
CRF: Biospecimen Collection and Processing

Displaying 51 - 79 of 79
CDE ID CDE Name Variable Name Definition Short Description Question Text Permissible Values Description Data Type Disease Specific Instructions Disease Specific Reference Population Classification (e.g., Core) Version Number Version Date CRF Name (CRF Module / Guideline) Sub Domain Name Domain Name Size Input Restrictions Min Value Max Value Measurement Type External Id Loinc External Id Snomed External Id caDSR External Id CDISC
C55362 Multiplex platform normalization technique text MultiplxPlatNormTechTxt Free-text field to describe normalization techniques for multiplex platforms Free-text field to describe normalization techniques for multiplex platforms Normalization techniques: Alphanumeric

For multiplex platforms (proteomics, metabolomics, luminex assays)

No references available Adult;Pediatric Exploratory 3.00 2013-07-16 14:01:43.01 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry

C58750 Blood collection tube additive type other text BldCollTubeAdditvTypOTH The free-text field related to other blood collection tube additive type The free-text field related to other blood collection tube additive type Other, specify Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental 1.00 2020-05-08 16:47:13.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry

C54748 Specimen baseline collection indicator SpecmnBaselineCollectInd The indicator related to baseline specimen being collected. The indicator related to baseline specimen being collected. Baseline specimen collected No;Yes;Unknown No;Yes;Unknown Alphanumeric

Collected within 12 hours of initial hospital presentation

No references available Adult;Pediatric Supplemental-Highly Recommended 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C55323 Specimen normal control collected indicator SpcmnNrmlCtrlCollectInd Indicator of whether or not normal or control samples were collected Indicator of whether or not normal or control samples were collected Normal/control samples collected No;Yes;Unknown No;Yes;Unknown Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C58719 Tobacco not applicable last year indicator TbccoNALastYrInd Indicates if the participant/subject used no tobacco products within the past year Indicates if the participant/subject used no tobacco products within the past year Date of last tobacco use (cigarette, cigar, chewing tobacco or pipe) N/A – has not used tobacco products in the past year N/A – has not used tobacco products in the past year Alphanumeric

Check if the participant/subject used no tobacco products within the past year

No references available Adult;Pediatric Supplemental 1.00 2020-05-07 11:16:23.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C55347 Microdialysis cerebral probe membrane length measuremement MicrodiaCrbrlPrbMembLengtMeasr The field to specify the membrane length for probes used for cerebral microdialysis specimens The field to specify the membrane length for probes used for cerebral microdialysis specimens Membrane length: Numeric Values

For cerebral microdialysis specimens

No references available Adult;Pediatric Exploratory 3.00 2013-06-21 00:00:00.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Free-Form Entry

C58740 Specimen collection grossly bloody indicator SpcmnCollectGrossBldyInd Indicate whether the specimen collection was grossly bloody Indicate whether the specimen collection was grossly bloody Collection grossly bloody No;Yes;Unknown No;Yes;Unknown Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2020-05-08 14:56:28.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C55363 Multiplex platform batch effect indicator MultiplxPlatBatchEffInd Indicator for whether there was batch effect for multiplex platforms Indicator for whether there was batch effect for multiplex platforms Presence of batch-effect? No;Yes No;Yes Alphanumeric

For multiplex platforms (proteomics, metabolomics, luminex assays)

No references available Adult;Pediatric Exploratory 3.00 2013-07-16 14:01:43.01 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C58751 Specimen expiration date SpcmnExprtnDate Date when the specimen will expire, if applicable Date when the specimen will expire, if applicable Date of sample expiration Date or Date & Time

Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.).

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2020-05-08 16:57:15.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Free-Form Entry

C54749 Cerebrospinal fluid collection method type CSFCollectMethoTyp The method related to cerebrospinal fluid (CSF) being collected. The method related to cerebrospinal fluid (CSF) being collected. Method of CSF acquisition Collection catheter;Lumbar Puncture;Other, specify;Sample collected from bag/reservoir Collection catheter;Lumbar Puncture;Other, specify;Sample collected from bag/reservoir Alphanumeric

Collection catheters include external ventricular and lumbar drain catheters. Other mehods can include VP shunt tap.

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2017-04-11 12:19:20.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C55325 Specimen convalescent collected indicator SpcmnConvalesCollectInd Indicator of whether or not convalescent samples were collected Indicator of whether or not convalescent samples were collected Convalescent samples collected: No;Yes;Unknown No;Yes;Unknown Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C58720 Collection time mortality status indicator CollTimeMortStatInd Indicate whether the participant/subject is living or deceased at the time of specimen collection Indicate whether the participant/subject is living or deceased at the time of specimen collection Living or Deceased at time of collection Living;Deceased Living;Deceased Alphanumeric

Choose one

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2020-05-07 11:26:15.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C55348 Device model number DevModelNum The model number for the device used The model number for the device used Model #: Numeric Values

For cerebral microdialysis specimens

No references available Adult;Pediatric Exploratory 3.00 2013-08-28 16:08:00.453 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Free-Form Entry

C58741 Specimen shipped indicator SpcmnShipdInd Indicate whether the specimen was shipped Indicate whether the specimen was shipped Sample shipped No;Yes;Unknown No;Yes;Unknown Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2020-05-08 15:00:21.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C55746 Specimen surround dry ice shipment indicator SpcmnSurrndDryIceShipInd The indicator related to whether the specimen was surrounded by dry ice for shipping The indicator related to whether the specimen was surrounded by dry ice for shipping Samples surrounded by dry ice to maintain temperature -80C or below throughout shipment: No;Yes No;Yes Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C58752 Specimen expiration not applicable indicator SpcmnExprtnNAInd Indicate whether there is no expiration date for the specimen Indicate whether there is no expiration date for the specimen Date of sample expiration N/A - no expiration N/A - no expiration Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2020-05-08 16:59:56.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C54750 Cerebrospinal fluid collection method other text CSFCollectMethoOTH The free-text field related to other for method related to cerebrospinal fluid (CSF) being collected. The free-text field related to other for method related to cerebrospinal fluid (CSF) being collected. Other, specify Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental 1.00 2017-04-11 12:19:20.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry

C55327 Specimen serial collected indicator SampleSerialCollectInd Indicator of whether or not serial samples were collected over time Indicator of whether or not serial samples were collected over time Serial specimens collected (over time): No;Yes;Unknown No;Yes;Unknown Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C58721 Lab specimen type other text LabSpecmnTypOTH The free-text field related to 'Lab specimen type' specifying other text The free-text field related to 'Lab specimen type' specifying other text Other, specify Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental 1.00 2020-05-07 12:40:28.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry

C55349 Microdialysis cerebral Ictus monitoring interval MicrodCrbrlIctusMonitorIntrvl The period of time elapsed between ictus and monitoring for cerebral microdialysis The period of time elapsed between ictus and monitoring for cerebral microdialysis Time from ictus to monitoring: Numeric Values

For cerebral microdialysis specimens

No references available Adult;Pediatric Exploratory 1.00 2017-04-12 17:44:54.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Free-Form Entry

C58742 Shipping conditions type ShipCondTyp Indicate the specimen shipping conditions Indicate the specimen shipping conditions Shipping conditions Dry ice;Overnight;Other, specify Dry ice;Overnight;Other, specify Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2020-05-08 15:03:28.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Multiple Pre-Defined Values Selected

C55747 Specimen insulate shipment box indicator SpcmnInsulateShipBoxInd The indicator related to whether the specimen insulated in a shipment box The indicator related to whether the specimen insulated in a shipment box Use insulated bio-shipment box: No;Yes No;Yes Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C58753 Specimen analysis date and time SpcmnAnlysisDateTime Date (and time if applicable and known) when the specimen was analyzed Date (and time if applicable and known) when the specimen was analyzed Date and time of analysis Date or Date & Time

Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.).

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2020-05-08 17:04:31.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Free-Form Entry

C54751 Cerebrospinal fluid collection anatomic site CSFCollectAnatSite The anatomic site related to collection of cerebrospinal fluid (CSF). The anatomic site related to collection of cerebrospinal fluid (CSF). Site of CSF acquisition Ventricular cistern;Lumbar cistern;Other, specify Ventricular cistern;Lumbar cistern;Other, specify Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2017-04-11 12:19:20.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C55329 Specimen storage barcode system used indicator SpecStrgBarcdSysUsedInd The indicator related to whether a specimen storage barcode system was used The indicator related to whether a specimen storage barcode system was used Samples torage bar code system (automated date/time) method used: No;Yes;Unknown No;Yes;Unknown Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C58722 Specimen collection position type SpcmnCollectPosTyp Indicate the position of the participant/subject during sample collection Indicate the position of the participant/subject during sample collection Patient position during sample collection Seating;Lying;Standing Seating;Lying;Standing Alphanumeric

Choose one

No references available Adult;Pediatric Supplemental 1.00 2020-05-07 14:12:41.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C10823 Alcohol last consumed date and time AlcohLastConDateTime Date (and time, if applicable and known) the participant/subject last drank alcohol Date (and time, if applicable and known) the participant/subject last drank alcohol Date last had an alcoholic drink Date or Date & Time

Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.).

No references available Adult;Pediatric Supplemental 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Free-Form Entry

C01701 Lab specimen collection date and time LabSpecmnCollDateTime Date (and time if applicable and known) when the specimen was collected Date (and time if applicable and known) when the specimen was collected Date and time of sample collection Date or Date & Time

Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.).

A Consensus Protocol for the Standardization of Cerebrospinal Fluid Collection and Biobanking; Teunissen, C.E., Neurology 2009; 73: 1914-1922. Adult;Pediatric Supplemental-Highly Recommended 3.00 2013-07-25 08:54:08.2 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Free-Form Entry

2004004
C10821 Food last consumed date and time FoodLstConsmDateTime Date (and time, if applicable and known) the participant/subject last ate food Date (and time, if applicable and known) the participant/subject last ate food Date and time last ate Date or Date & Time

Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.).

HUPO Plasma Proteome Project specimen collection and handling: Towards the standardization of parameters for plasma proteome samples; Rai, A.J., Proteomics 2005, 5, 3262-3277. Adult;Pediatric Supplemental 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Free-Form Entry

CSV