CDE Detailed Report

Disease: Stroke
Subdomain Name: Laboratory Tests and Biospecimens/Biomarkers
CRF: Biospecimen Collection and Processing

Displaying 51 - 79 of 79
CDE ID CDE Name Variable Name Definition Short Description Question Text Permissible Values Description Data Type Disease Specific Instructions Disease Specific Reference Population Classification (e.g., Core) Version Number Version Date CRF Name (CRF Module / Guidance) Subdomain Name Domain Name Size Input Restrictions Min Value Max Value Measurement Type External Id Loinc External Id Snomed External Id caDSR External Id CDISC
C58752 Specimen expiration not applicable indicator SpcmnExprtnNAInd Indicate whether there is no expiration date for the specimen Indicate whether there is no expiration date for the specimen Date of sample expiration N/A - no expiration N/A - no expiration Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2020-05-08 16:59:56.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C54750 Cerebrospinal fluid collection method other text CSFCollectMethoOTH The free-text field related to other for method related to cerebrospinal fluid (CSF) being collected The free-text field related to other for method related to cerebrospinal fluid (CSF) being collecte Other, specify Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental 1.00 2017-04-11 12:19:20.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry

C58721 Lab specimen type other text LabSpecmnTypOTH The free-text field related to 'Lab specimen type' specifying other text The free-text field related to 'Lab specimen type' specifying other text Other, specify Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental 1.00 2020-05-07 12:40:28.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry

C55327 Specimen serial collected indicator SampleSerialCollectInd Indicator of whether or not serial samples were collected over time Indicator of whether or not serial samples were collected over time Serial specimens collected (over time): No;Yes;Unknown No;Yes;Unknown Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C58742 Shipping conditions type ShipCondTyp Indicate the specimen shipping conditions Indicate the specimen shipping conditions Shipping conditions Dry ice;Overnight;Other, specify Dry ice;Overnight;Other, specify Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2020-05-08 15:03:28.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Multiple Pre-Defined Values Selected

C55349 Microdialysis cerebral Ictus monitoring interval MicrodCrbrlIctusMonitorIntrvl The period of time elapsed between ictus and monitoring for cerebral microdialysis The period of time elapsed between ictus and monitoring for cerebral microdialysis Time from ictus to monitoring: Numeric Values

For cerebral microdialysis specimens

No references available Adult;Pediatric Exploratory 1.00 2017-04-12 17:44:54.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Free-Form Entry

C55747 Specimen insulate shipment box indicator SpcmnInsulateShipBoxInd The indicator related to whether the specimen insulated in a shipment box The indicator related to whether the specimen insulated in a shipment box Use insulated bio-shipment box: No;Yes No;Yes Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C58753 Specimen analysis date and time SpcmnAnlysisDateTime Date (and time if applicable and known) when the specimen was analyzed Date (and time if applicable and known) when the specimen was analyzed Date and time of analysis Date or Date & Time

Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.).

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2020-05-08 17:04:31.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Free-Form Entry

C54751 Cerebrospinal fluid collection anatomic site CSFCollectAnatSite The anatomic site related to collection of cerebrospinal fluid (CSF) The anatomic site related to collection of cerebrospinal fluid (CSF Site of CSF acquisition Ventricular cistern;Lumbar cistern;Other, specify Ventricular cistern;Lumbar cistern;Other, specify Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2017-04-11 12:19:20.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C58722 Specimen collection position type SpcmnCollectPosTyp Indicate the position of the participant/subject during sample collection Indicate the position of the participant/subject during sample collection Patient position during sample collection Seating;Lying;Standing Seating;Lying;Standing Alphanumeric

Choose one

No references available Adult;Pediatric Supplemental 1.00 2020-05-07 14:12:41.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C55329 Specimen storage barcode system used indicator SpecStrgBarcdSysUsedInd The indicator related to whether a specimen storage barcode system was used The indicator related to whether a specimen storage barcode system was used Samples torage bar code system (automated date/time) method used: No;Yes;Unknown No;Yes;Unknown Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C58743 Shipping conditions type other text ShipCondOTH The free-text field related to other shipping conditions type The free-text field related to other shipping conditions typ Other, specify Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental 1.00 2020-05-08 15:29:37.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry

C55352 Microdialysate source type MicrodiaSourcTyp The free-text field to specify the type of microdialysate specimen source The free-text field to specify the type of microdialysate specimen source Composition and source of the microdialysate: Alphanumeric

For cerebral microdialysis specimens

No references available Adult;Pediatric Exploratory 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry

C56123 Specimen centrifugation performed indicator SpecCentrifPerfrmdInd The indicator relating to whether centrifugation was performed on the specimen The indicator relating to whether centrifugation was performed on the specime Sample centrifuged No;Yes;Unknown No;Yes;Unknown Alphanumeric Adult;Pediatric Supplemental-Highly Recommended 1.00 2017-06-06 13:23:19.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C58754 Multiplex platform statistical methodology type MultiplxPlatStatMethdTyp Indicate the statistical methodology used to address multiple hypothesis testing Indicate the statistical methodology used to address multiple hypothesis testing Statistical methodology used to address multiple hypothesis testing Alphanumeric

For multiplex platforms (proteomics, metabolomics, luminex assays)

No references available Adult;Pediatric Supplemental 1.00 2020-05-11 11:25:52.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry

C54752 Cerebrospinal fluid collection anatomic site other text CSFCollectAnatSiteOTH The free-text field related to other anatomic site related to collection of cerebrospinal fluid (CSF) The free-text field related to other anatomic site related to collection of cerebrospinal fluid (CSF Other, specify Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental 1.00 2017-04-11 12:19:20.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry

C58723 Blood collection method type other text BldCollMthdTypOTH The free-text field related to 'Blood collection method type' specifying other text The free-text field related to 'Blood collection method type' specifying other text Other, specify Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental 1.00 2020-05-07 16:39:23.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry

C55338 Specimen freeze thaw cycle prior biomarker assay number SpcmnFrzThwCycPriorBiomAssaNum The number of freeze thaw cycles the sample underwent prior to the biomarker assay The number of freeze thaw cycles the sample underwent prior to the biomarker assay Number of freeze/thaw cycles the sample went through prior to biomarker assay: Numeric Values

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Free-Form Entry

C58744 Specimen ambient light protection indicator SpcmnAmbntLightProtectInd Indicate whether the specimen was protected from ambient light Indicate whether the specimen was protected from ambient light Sample protected from ambient light No;Yes;Unknown No;Yes;Unknown Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2020-05-08 15:33:27.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C01705 Lab test name LabTestName Name representing the lab test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested, and any special instructions Name representing the lab test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested, and any special instructions Laboratory test(s) conducted Glucose;Immunoglobulin G (IgG);Oligoclonal Bands;Other, specify Glucose;Immunoglobulin G (IgG);Oligoclonal Bands;Other, specify Alphanumeric

"Indicate the name of each laboratory test that is run on the specimen. Refer to the document entitled, ""Laboratory Tests Permissible Values for Stroke"" for a listing and description of the recommended lab tests."

No references available Adult;Pediatric Supplemental-Highly Recommended 4.00 2024-03-18 15:21:17.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

2003746
C55353 Microdialysate composition type text MicrodiaCompTypTxt The free-text field to specify the composition of microdialysate specimen The free-text field to specify the composition of microdialysate specimen Composition and source of the microdialysate: Alphanumeric

For cerebral microdialysis specimens

No references available Adult;Pediatric Exploratory 3.00 2013-07-24 11:38:01.2 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 500

Free-Form Entry

C57923 Blood collection tube additive type BloodCollectTubeAdditivTyp Type of additives used in blood collection tube Type of additives used in blood collection tube Additives used to store sample EDTA;Citrate;Heparin;None;Other, specify EDTA;Citrate;Heparin;None;Other, specify Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2018-01-15 15:45:04.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Multiple Pre-Defined Values Selected

C58873 Blood collection method category BldCollMthdCat Indicate the method of blood collection Indicate the method of blood collection Method of blood collection Routine venipuncture w/ tourniquet;Routine venipuncture w/o tourniquet;Drawn through peripheral venous catheter;Drawn through central venous catheter;Drawn through PICC (peripherally inserted central catheter);Drawn through peripheral arterial puncture;Drawn through arterial peripheral line;Drawn through arterial central line;Special procedures;Other, specify;Unknown Routine venipuncture w/ tourniquet;Routine venipuncture w/o tourniquet;Drawn through peripheral venous catheter;Drawn through central venous catheter;Drawn through PICC (peripherally inserted central catheter);Drawn through peripheral arterial puncture;Drawn through arterial peripheral line;Drawn through arterial central line;Special procedures;Other, specify;Unknown Alphanumeric

Choose one

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2020-05-18 13:53:55.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C54753 Specimen collection tube type SpecimenCollectionTubTyp Type of tube used for specimen collection Type of tube used for specimen collectio Type of collection tubes used Blood cultures-SPS;Citrate Tube;Serum Tube;Vacutainer SST/Gel Separator Tube;Vacutainer PST;Heparin Tube;Gel Separator Tube with Heparin;EDTA Tube;Fluoride (glucose) Tube;Polypropylene;Other, specify Blood cultures-SPS;Citrate Tube;Serum Tube;Vacutainer SST/Gel Separator Tube;Vacutainer PST;Heparin Tube;Gel Separator Tube with Heparin;EDTA Tube;Fluoride (glucose) Tube;Polypropylene;Other, specify Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2017-04-11 12:19:20.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C58724 Specimen hemolyzed indicator SpcmnHemolyzInd Indicate whether the sample was hemolyzed (Gross hemolysis, microscope not required) Indicate whether the sample was hemolyzed (Gross hemolysis, microscope not required) Was sample hemolyzed (Gross hemolysis, microscope not required) No;Yes;Unknown No;Yes;Unknown Alphanumeric

Choose one

No references available Adult;Pediatric Supplemental-Highly Recommended 1.00 2020-05-07 16:43:52.0 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C55340 Specimen selective inhibitor used indicator SpcmnSelecvInhibitUsedInd Indicator of whether or not selective inhibitors were used on the sample Indicator of whether or not selective inhibitors were used on the sample Selective inhibitors used (depending on target analyte): No;Yes No;Yes Alphanumeric

No instructions available

No references available Adult;Pediatric Supplemental-Highly Recommended 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C01701 Lab specimen collection date and time LabSpecmnCollDateTime Date (and time if applicable and known) when the specimen was collected Date (and time if applicable and known) when the specimen was collected Date and time of sample collection Date or Date & Time

Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.).

A Consensus Protocol for the Standardization of Cerebrospinal Fluid Collection and Biobanking; Teunissen, C.E., Neurology 2009; 73: 1914-1922. Adult;Pediatric Supplemental-Highly Recommended 3.00 2013-07-25 08:54:08.2 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Free-Form Entry

2004004
C10821 Food last consumed date and time FoodLstConsmDateTime Date (and time, if applicable and known) the participant/subject last ate food Date (and time, if applicable and known) the participant/subject last ate food Date and time last ate Date or Date & Time

Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.).

HUPO Plasma Proteome Project specimen collection and handling: Towards the standardization of parameters for plasma proteome samples; Rai, A.J., Proteomics 2005, 5, 3262-3277. Adult;Pediatric Supplemental 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Free-Form Entry

C10823 Alcohol last consumed date and time AlcohLastConDateTime Date (and time, if applicable and known) the participant/subject last drank alcohol Date (and time, if applicable and known) the participant/subject last drank alcohol Date last had an alcoholic drink Date or Date & Time

Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.).

No references available Adult;Pediatric Supplemental 3.00 2013-07-22 16:57:17.79 Biospecimen Collection and Processing Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Free-Form Entry

CSV