CDE Detailed Report
Disease: Traumatic Brain Injury
Subdomain Name: Laboratory Tests and Biospecimens/Biomarkers
CRF: Laboratory Tests
Displaying 1 - 24 of 24
Subdomain Name: Laboratory Tests and Biospecimens/Biomarkers
CRF: Laboratory Tests
Displaying 1 - 24 of 24
| CDE ID | CDE Name | Variable Name | Definition | Short Description | Question Text | Permissible Values | Description | Data Type | Disease Specific Instructions | Disease Specific Reference | Population | Classification (e.g., Core) | Version Number | Version Date | CRF Name (CRF Module / Guidance) | Subdomain Name | Domain Name | Size | Input Restrictions | Min Value | Max Value | Measurement Type | External Id Loinc | External Id Snomed | External Id caDSR | External Id CDISC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C01707 | Lab test abnormality significance type | LabTestAbnrmlySignfcnceTyp | Indicator as to whether or not the abnormal lab result for the associated test was considered clinically significant for the participant/subject | Indicator as to whether or not the abnormal lab result for the associated test was considered clinically significant for the participant/subjec | If abnormal, clinically significant? | Clinically Significant;Not Clinically Significant | Clinically Significant;Not Clinically Significant | Alphanumeric |
Choose one. If the laboratory test result is abnormal, indicate if the physician considers the result clinically significant. |
No references available | Adult;Pediatric | Supplemental | 3.00 | 2013-07-25 08:54:08.2 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
3179449 | |||||||
| C01719 | Drug screen sample type | DrgScrnSamplTyp | Type of sample used to perform the toxic drug screen | Type of sample used to perform the toxic drug screen | Drug screen sample type | Serum;Urine;Hair;Saliva;Other, specify | Serum;Urine;Hair;Saliva;Other, specify | Alphanumeric |
Choose all that apply. |
Substance Abuse and Mental Health Services Administration drug testing information - http://workplace.samhsa.gov/Dtesting.html | Adult;Pediatric | Supplemental | 3.00 | 2013-07-20 10:21:25.65 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations |
Multiple Pre-Defined Values Selected |
||||||||
| C01709 | Lab test result status | LabTestResltStatus | Status of the laboratory test result, usually based upon the comparison of the test result to the normal range for the lab test performed | Status of the laboratory test result, usually based upon the comparison of the test result to the normal range for the lab test performed | Was test result abnormal? | Abnormal;Normal;Unknown | Abnormal;Normal;Unknown | Alphanumeric |
Choose one. Indicate if the laboratory test result is abnormal. Abnormal means the test result falls outside the normal range. |
No references available | Adult;Pediatric | Supplemental | 3.00 | 2013-07-25 08:54:08.2 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
2841229v1 | |||||||
| C01720 | Lab test LOINC code | LabTestLOINCCode | Identifier name given to a test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested, and any special instructions | Identifier name given to a test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested, and any special instruction | Alphanumeric |
Code the laboratory test with Logical Observation Identifiers Names and Codes (LOINC) |
Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org | Adult;Pediatric | Supplemental | 3.00 | 2013-07-25 08:54:08.2 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations | 7 |
Free-Form Entry |
||||||||||
| C01710 | Pregnancy test qualitative result value | PregTestQualResltVal | Result of the pregnancy test | Result of the pregnancy test | Pregnancy test qualitative result | Positive;Negative | Positive;Negative | Alphanumeric |
Choose one. |
Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org | Adult;Pediatric | Supplemental | 3.00 | 2013-07-25 08:54:08.2 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C18671 | Drug screen positive substance other text | DrgScrnPosSubstncOTH | The free-text field related to 'Drug screen positive substance type' specifying other text. Type of substance(s) found positive in overall toxic drug screen | The free-text field related to 'Drug screen positive substance type' specifying other text. Type of substance(s) found positive in overall toxic drug screen | Other, specify | Alphanumeric |
Choose all that apply. |
Substance Abuse and Mental Health Services Administration drug testing information - http://workplace.samhsa.gov/Dtesting.html | Adult;Pediatric | Supplemental | 1.00 | 2014-05-27 13:34:46.0 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations | 4000 |
Free-Form Entry |
|||||||||
| C01711 | Lab test result unit of measure | LabTestResltUoM | Unit of measure for the laboratory test result | Unit of measure for the laboratory test result | Units for result | Alphanumeric |
Choose or specify the appropriate response. |
Unified Code for Units of Measure (UCUM) - http://unitsofmeasure.org/ | Adult;Pediatric | Supplemental | 3.00 | 2013-07-25 08:54:08.2 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations | 255 |
Free-Form Entry |
2787947 | ||||||||
| C18672 | Drug screen sample other text | DrgScrnSamplOTH | The free-text field related to 'Drug screen sample type' specifying other text. Type of sample used to perform the toxic drug screen | The free-text field related to 'Drug screen sample type' specifying other text. Type of sample used to perform the toxic drug screen | Other, specify | Alphanumeric |
Choose all that apply. |
Substance Abuse and Mental Health Services Administration drug testing information - http://workplace.samhsa.gov/Dtesting.html | Adult;Pediatric | Supplemental | 1.00 | 2014-05-27 13:34:46.0 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations | 4000 |
Free-Form Entry |
|||||||||
| C01712 | Lab specimen type | LabSpecmnTyp | Type of specimen collected for the laboratory test | Type of specimen collected for the laboratory test | Lab specimen type | Venous blood - serum;Venous blood - plasma;Venous blood - platelets;Venous blood - buffy coat;Venous blood - whole;Arterial blood - serum;Arterial blood - plasma;Arterial blood - platelets;Arterial blood - buffy coat;Arterial blood - whole;Newborn cord blood;Urine;CSF;Buccal swab;Brain tissue;Saliva;Amniotic fluid;Placenta;Other, specify;Blood | Venous blood - serum;Venous blood - plasma;Venous blood - platelets;Venous blood - buffy coat;Venous blood - whole;Arterial blood - serum;Arterial blood - plasma;Arterial blood - platelets;Arterial blood - buffy coat;Arterial blood - whole;Newborn cord blood;Urine;Cerebral spinal fluid;Buccal swab;Brain tissue;Saliva;Amniotic fluid;Placenta;Other, specify;Blood | Alphanumeric |
Choose one |
HUPO Plasma Proteome Project specimen collection and handling: Towards the standardization of parameters for plasma proteome samples; Rai, A.J., Proteomics 2005, 5, 3262-3277. | Adult;Pediatric | Supplemental | 3.00 | 2013-07-20 10:21:25.65 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C18729 | Lab panel other text | LabPanelOTH | The free-text field related to 'Lab panel category' specifying other text. Category or panel of lab tests, often logically grouped according to type of testing (Hematology, Chemistry, Urinalysis) or specimen type (Blood, Urine, CSF) | The free-text field related to 'Lab panel category' specifying other text. Category or panel of lab tests, often logically grouped according to type of testing (Hematology, Chemistry, Urinalysis) or specimen type (Blood, Urine, CSF) | Other, specify | Alphanumeric |
Choose one. |
Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org | Adult;Pediatric | Supplemental | 1.00 | 2014-05-27 13:34:46.0 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations | 4000 |
Free-Form Entry |
3158057 | ||||||||
| C01701 | Lab specimen collection date and time | LabSpecmnCollDateTime | Date (and time if applicable and known) when the specimen was collected | Date (and time if applicable and known) when the specimen was collected | Date collected Time collected | Date or Date & Time |
Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.). |
Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org | Adult;Pediatric | Supplemental | 3.00 | 2013-07-25 08:54:08.2 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations |
Free-Form Entry |
2004004 | |||||||||
| C01713 | Lab test result unit of measure UCUM code | LabTestResltUoMUCUMCode | Unified Code for Units of Measure (UCUM) unit code for the result of the lab test being performed on the specimen | Unified Code for Units of Measure (UCUM) unit code for the result of the lab test being performed on the specimen | Alphanumeric |
Code the lab test result unit of measure using UCUM codes. |
Unified Code for Units of Measure (UCUM) - http://unitsofmeasure.org/ | Adult;Pediatric | Supplemental | 3.00 | 2013-07-25 08:54:08.2 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations | 255 |
Free-Form Entry |
||||||||||
| C18730 | Lab specimen other text | LabSpecmnOTH | The free-text field related to 'Lab specimen type' specifying other text. Type of specimen collected for the laboratory test | The free-text field related to 'Lab specimen type' specifying other text. Type of specimen collected for the laboratory test | Other, specify | Alphanumeric |
Choose one |
HUPO Plasma Proteome Project specimen collection and handling: Towards the standardization of parameters for plasma proteome samples; Rai, A.J., Proteomics 2005, 5, 3262-3277. | Adult;Pediatric | Supplemental | 1.00 | 2014-05-27 13:34:46.0 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations | 4000 |
Free-Form Entry |
|||||||||
| C01702 | Pregnancy test date and time | PregTestDateTime | The date (and time if applicable and known) when the pregnancy test was performed | The date (and time if applicable and known) when the pregnancy test was performed | Pregnancy test date and time | Date or Date & Time |
Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.). |
Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org | Adult;Pediatric | Supplemental | 3.00 | 2013-07-25 08:54:08.2 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations |
Free-Form Entry |
||||||||||
| C01714 | Pregnancy test not applicable reason | PregTestNotApplcblRsn | Reason that performance of a pregnancy test was not applicable to the participant/subject | Reason that performance of a pregnancy test was not applicable to the participant/subject | Pregnancy test: Reason Test N/A | Post-Menopausal;Surgically sterile;Non-surgically sterile;Male | Post-Menopausal;Surgically sterile;Non-surgically sterile;Male | Alphanumeric |
Choose one. Response is obtained from report by participant/subject, reliable proxy or caretaker, attending medical health professional or medical records. |
No references available | Adult;Pediatric | Supplemental | 3.00 | 2013-07-25 08:54:08.2 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C18731 | Lab test other text | LabTestOTH | The free-text field related to 'Lab test name' specifying other text. Name representing the lab test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested and any special instructions | The free-text field related to 'Lab test name' specifying other text. Name representing the lab test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested and any special instruction | Other, specify | Alphanumeric |
Choose one. |
Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org | Adult;Pediatric | Supplemental | 1.00 | 2014-05-27 13:34:46.0 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations | 4000 |
Free-Form Entry |
2003746 | ||||||||
| C01703 | Lab panel category | LabPanelCat | Category or panel of lab tests, often logically grouped according to type of testing (Hematology, Chemistry, Urinalysis) or specimen type (Blood, Urine, CSF) | Category or panel of lab tests, often logically grouped according to type of testing (Hematology, Chemistry, Urinalysis) or specimen type (Blood, Urine, CSF) | Lab panel | Chemistry;Hematology;Urinalysis;Other, specify | Chemistry;Hematology;Urinalysis;Other, specify | Alphanumeric |
Choose one. |
Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org | Adult;Pediatric | Supplemental | 3.00 | 2013-07-25 08:54:08.2 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
3158057 | |||||||
| C01715 | Alcohol blood test performed indicator | AlchBldTstPerformInd | Indicator of whether blood alcohol test was performed | Indicator of whether blood alcohol test was performed | Alcohol blood test performed indicator | Yes;No;Unknown | Yes;No;Unknown | Alphanumeric |
Choose one. Response is obtained from report by participant/subject, reliable proxy or caretaker, attending medical health professional or medical records. |
Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org | Adult;Pediatric | Supplemental | 3.00 | 2013-07-20 10:21:25.65 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C01704 | Pregnancy test specimen type | PregTestSpecmnTyp | Type of specimen collected to perform the pregnancy test | Type of specimen collected to perform the pregnancy test | Pregnancy Test Type | Blood;Urine | Blood;Urine | Alphanumeric |
Choose one. |
Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org http://www.nlm.nih.gov/medlineplus/ency/article/003432.htm | Adult;Pediatric | Supplemental | 3.00 | 2013-07-24 11:38:01.2 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C01716 | Alcohol blood level measurement | AlchBldLvlMeasr | Measurement of blood alcohol content (mg/100 ml blood) | Measurement of blood alcohol content (mg/100 ml blood) | Alcohol blood level measurement | Numeric Values |
No instructions available |
Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org | Adult;Pediatric | Supplemental | 3.00 | 2013-07-20 10:21:25.65 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations |
Free-Form Entry |
milligram of alcohol per 100 milliliters of blood | |||||||||
| C01705 | Lab test name | LabTestName | Name representing the lab test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested, and any special instructions | Name representing the lab test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested, and any special instructions | Test Name | Frataxin Level;GAA repeat-expansion mutation;Serum N-terminal atrial natriuretic peptide (ANP-N);B-type natriuretic peptide (BNP);Oral glucose tolerance;Vitamin E;Lactate;Troponin I;Troponin T;Creatine Kinase;Creatine Kinase-Myocardial Bands (CK-MB);Hemoglobin Electrophoresis;Urine pH;Urine Nitrite;Urine Creatinine;Urine 8-OH-2-deoxyguanosine/creatinine ratio;8-OH-2-deoxyguanosine;8-isoprostanes;Plasma malondialdehyde;Other, specify;Urine White Blood Cells (WBC);Atrial natriuretic peptide (ANP);Glucose;Fasting Glucose;Fasting Insulin;Urea;Creatinine;Amylase;Aspartate Aminotransferase (AST/ASAT/SGOT);Alanine Aminotransferase (ALT/ALAT/SGPT);Gamma-glutamyl transpeptidase (GGT);Lactate Dehydrogenase (LDH);Alkaline Phosphatase;Total Bilirubin;Sodium (Na);Potassium (K);Hemoglobin (HB);Hematocrit (HCT);White Blood Cell Count (WBC);Glycosylated Hemoglobin (HgBA1C);Neutrophil Count;Lymphocyte Count;Monocyte Count;Eosinophil Count;Platelet Count;Prothrombin Time (PT);Iron;Total Iron Binding Capacity(TIBC);Ferritin;Magnesium (Mg);Phosphate (PO4);Calcium (Ca);Ionized Calcium;Bicarbonate (HCO3);International Normalized Ratio (INR);Chloride (Cl);Carbon Dioxide (CO2);Anion Gap;Blood Urea Nitrogen (BUN);Vitamin B12;Total Cholesterol (TCHOL);Low Density Lipoprotein (LDL);High Density Lipoprotein (HDL);Triglycerides (TGs);Very Low Density Lipoprotein (VLDL);Lipoprotein (a) [Lp(a)];Apolipoprotein-I (apo A1);Apolipoprotein B (apo B);apolipoprotein E (apo E);C-Reactive Protein;Albumin;Cortisol;Glucose D-stick;Glucose serum;Partial Thromboplastin Time (PTT);Phenobarb;Phenytoin (Dilantin);Pre-Albumin;Serum OSM;Total protein | Frataxin Level;GAA repeat-expansion mutation;Serum N-terminal atrial natriuretic peptide (ANP-N);B-type natriuretic peptide (BNP);Oral glucose tolerance;Vitamin E;Lactate;Troponin I;Troponin T;Creatine Kinase;Creatine Kinase-Myocardial Bands (CK-MB);Hemoglobin Electrophoresis;Urine pH;Urine Nitrite;Urine Creatinine;Urine 8-OH-2-deoxyguanosine/creatinine ratio;8-OH-2-deoxyguanosine;8-isoprostanes;Plasma malondialdehyde;Other, specify;Urine White Blood Cells (WBC);Atrial natriuretic peptide (ANP);Glucose;Fasting Glucose;Fasting Insulin;Urea;Creatinine;Amylase;Aspartate Aminotransferase (AST/ASAT/SGOT);Alanine Aminotransferase (ALT/ALAT/SGPT);Gamma-glutamyl transpeptidase (GGT);Lactate Dehydrogenase (LDH);Alkaline Phosphatase;Total Bilirubin;Sodium (Na);Potassium (K);Hemoglobin (HB);Hematocrit (HCT);White Blood Cell Count (WBC);Glycosylated Hemoglobin (HgBA1C);Neutrophil Count;Lymphocyte Count;Monocyte Count;Eosinophil Count;Platelet Count;Prothrombin Time (PT);Iron;Total Iron Binding Capacity(TIBC);Ferritin;Magnesium (Mg);Phosphate (PO4);Calcium (Ca);Ionized Calcium;Bicarbonate (HCO3);International Normalized Ratio (INR);Chloride (Cl);Carbon Dioxide (CO2);Anion Gap;Blood Urea Nitrogen (BUN);Vitamin B12;Total Cholesterol (TCHOL);Low Density Lipoprotein (LDL);High Density Lipoprotein (HDL);Triglycerides (TGs);Very Low Density Lipoprotein (VLDL);Lipoprotein (a) [Lp(a)];Apolipoprotein-I (apo A1);Apolipoprotein B (apo B);apolipoprotein E (apo E);C-Reactive Protein;Albumin;Cortisol;Glucose D-stick;Glucose serum;Partial Thromboplastin Time (PTT);Phenobarb;Phenytoin (Dilantin);Pre-Albumin;Serum OSM;Total protein | Alphanumeric |
Choose one. |
Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org | Adult;Pediatric | Supplemental | 4.00 | 2024-03-18 15:21:17.0 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
2003746 | |||||||
| C01717 | Drug screen qualitative result | DrgScrnQualReslt | Overall result of toxic drug screen | Overall result of toxic drug screen | Drug screen qualitative result | Negative;Positive;Inconclusive;Not available | Negative;Positive;Inconclusive;Not available | Alphanumeric |
No instructions available |
Substance Abuse and Mental Health Services Administration drug testing information - http://workplace.samhsa.gov/Dtesting.html | Adult;Pediatric | Supplemental | 3.00 | 2013-07-20 10:21:25.65 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C01706 | Lab test result text | LabTestResltTxt | Result of the laboratory test | Result of the laboratory test | Result | Alphanumeric |
Enter the alphanumeric result |
Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org | Adult;Pediatric | Supplemental | 3.00 | 2013-07-25 08:54:08.2 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations | 4000 |
Free-Form Entry |
2183364 | ||||||||
| C01718 | Drug screen positive substance type | DrgScrnPosSubstncTyp | Type of substance(s) found positive in overall toxic drug screen | Type of substance(s) found positive in overall toxic drug screen | Drug screen screen positive type | Cocaine metabolite;Marijuana metabolites;Opiates (codeine and morphine);Phencyclidine;Barbiturates;Benzodiazepines;Methadone;Propoxyphene;Other, specify;Amphetamines | Cocaine metabolite;Marijuana metabolites;Opiates (codeine and morphine);Phencyclidine;Barbiturates;Benzodiazepines;Methadone;Propoxyphene;Other, specify;Amphetamines | Alphanumeric |
Choose all that apply. |
Substance Abuse and Mental Health Services Administration drug testing information - http://workplace.samhsa.gov/Dtesting.html | Adult;Pediatric | Supplemental | 3.00 | 2013-07-20 10:21:25.65 | Laboratory Tests | Laboratory Tests and Biospecimens/Biomarkers | Assessments and Examinations |
Multiple Pre-Defined Values Selected |
