CDE Detailed Report

Disease: Traumatic Brain Injury
Sub-Domain: Laboratory Tests and Biospecimens/Biomarkers
CRF: Laboratory Tests

Displaying 1 - 24 of 24
CDE ID CDE Name Variable Name Definition Short Description Question Text Permissible Values Description Data Type Disease Specific Instructions Disease Specific Reference Population Classification (e.g., Core) Version Number Version Date CRF Name (CRF Module / Guideline) Sub Domain Name Domain Name Size Input Restrictions Min Value Max Value Measurement Type External Id Loinc External Id Snomed External Id caDSR External Id CDISC
C18730 Lab specimen other text LabSpecmnOTH The free-text field related to 'Lab specimen type' specifying other text. Type of specimen collected for the laboratory test The free-text field related to 'Lab specimen type' specifying other text. Type of specimen collected for the laboratory test Other, specify Alphanumeric

Choose one

HUPO Plasma Proteome Project specimen collection and handling: Towards the standardization of parameters for plasma proteome samples; Rai, A.J., Proteomics 2005, 5, 3262-3277. Adult;Pediatric Supplemental 1.00 2014-05-27 13:34:46.0 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 4000

Free-Form Entry

C01702 Pregnancy test date and time PregTestDateTime The date (and time if applicable and known) when the pregnancy test was performed The date (and time if applicable and known) when the pregnancy test was performed Pregnancy test date and time Date or Date & Time

Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.).

Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org Adult;Pediatric Supplemental 3.00 2013-07-25 08:54:08.2 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

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C01714 Pregnancy test not applicable reason PregTestNotApplcblRsn Reason that performance of a pregnancy test was not applicable to the participant/subject Reason that performance of a pregnancy test was not applicable to the participant/subject Pregnancy test: Reason Test N/A Post-Menopausal;Surgically sterile;Non-surgically sterile;Male Post-Menopausal;Surgically sterile;Non-surgically sterile;Male Alphanumeric

Choose one. Response is obtained from report by participant/subject, reliable proxy or caretaker, attending medical health professional or medical records.

No references available Adult;Pediatric Supplemental 3.00 2013-07-25 08:54:08.2 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C18731 Lab test other text LabTestOTH The free-text field related to 'Lab test name' specifying other text. Name representing the lab test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested and any special instructions The free-text field related to 'Lab test name' specifying other text. Name representing the lab test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested and any special instruction Other, specify Alphanumeric

Choose one.

Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org Adult;Pediatric Supplemental 1.00 2014-05-27 13:34:46.0 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 4000

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2003746
C01703 Lab panel category LabPanelCat Category or panel of lab tests, often logically grouped according to type of testing (Hematology, Chemistry, Urinalysis) or specimen type (Blood, Urine, CSF) Category or panel of lab tests, often logically grouped according to type of testing (Hematology, Chemistry, Urinalysis) or specimen type (Blood, Urine, CSF) Lab panel Chemistry;Hematology;Urinalysis;Other, specify Chemistry;Hematology;Urinalysis;Other, specify Alphanumeric

Choose one.

Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org Adult;Pediatric Supplemental 3.00 2013-07-25 08:54:08.2 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

3158057
C01715 Alcohol blood test performed indicator AlchBldTstPerformInd Indicator of whether blood alcohol test was performed Indicator of whether blood alcohol test was performed Alcohol blood test performed indicator Yes;No;Unknown Yes;No;Unknown Alphanumeric

Choose one. Response is obtained from report by participant/subject, reliable proxy or caretaker, attending medical health professional or medical records.

Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org Adult;Pediatric Supplemental 3.00 2013-07-20 10:21:25.65 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C01704 Pregnancy test specimen type PregTestSpecmnTyp Type of specimen collected to perform the pregnancy test Type of specimen collected to perform the pregnancy test Pregnancy Test Type Blood;Urine Blood;Urine Alphanumeric

Choose one.

Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org http://www.nlm.nih.gov/medlineplus/ency/article/003432.htm Adult;Pediatric Supplemental 3.00 2013-07-24 11:38:01.2 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C01716 Alcohol blood level measurement AlchBldLvlMeasr Measurement of blood alcohol content (mg/100 ml blood) Measurement of blood alcohol content (mg/100 ml blood) Alcohol blood level measurement Numeric Values

No instructions available

Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org Adult;Pediatric Supplemental 3.00 2013-07-20 10:21:25.65 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

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milligram of alcohol per 100 milliliters of blood
C01705 Lab test name LabTestName Name representing the lab test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested, and any special instructions Name representing the lab test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested, and any special instruction Test Name Frataxin Level;GAA repeat-expansion mutation;Serum N-terminal atrial natriuretic peptide (ANP-N);B-type natriuretic peptide (BNP);Oral glucose tolerance;Vitamin E;Lactate;Troponin I;Troponin T;Creatine Kinase;Creatine Kinase-Myocardial Bands (CK-MB);Hemoglobin Electrophoresis;Urine pH;Urine Nitrite;Urine Creatinine;Urine 8-OH-2-deoxyguanosine/creatinine ratio;8-OH-2-deoxyguanosine;8-isoprostanes;Plasma malondialdehyde;Other, specify;Urine White Blood Cells (WBC);Atrial natriuretic peptide (ANP);Glucose;Fasting Glucose;Fasting Insulin;Urea;Creatinine;Amylase;Aspartate Aminotransferase (AST/ASAT/SGOT);Alanine Aminotransferase (ALT/ALAT/SGPT);Gamma-glutamyl transpeptidase (GGT);Lactate Dehydrogenase (LDH);Alkaline Phosphatase;Total Bilirubin;Sodium (Na);Potassium (K);Hemoglobin (HB);Hematocrit (HCT);White Blood Cell Count (WBC);Glycosylated Hemoglobin (HgBA1C);Neutrophil Count;Lymphocyte Count;Monocyte Count;Eosinophil Count;Platelet Count;Prothrombin Time (PT);Iron;Total Iron Binding Capacity(TIBC);Ferritin;Magnesium (Mg);Phosphate (PO4);Calcium (Ca);Ionized Calcium;Bicarbonate (HCO3);International Normalized Ratio (INR);Chloride (Cl);Carbon Dioxide (CO2);Anion Gap;Blood Urea Nitrogen (BUN);Vitamin B12;Total Cholesterol (TCHOL);Low Density Lipoprotein (LDL);High Density Lipoprotein (HDL);Triglycerides (TGs);Very Low Density Lipoprotein (VLDL);Lipoprotein (a) [Lp(a)];Apolipoprotein-I (apo A1);Apolipoprotein B (apo B);apolipoprotein E (apo E);C-Reactive Protein;Albumin;Cortisol;Glucose D-stick;Glucose serum;Partial Thromboplastin Time (PTT);Phenobarb;Phenytoin (Dilantin);Pre-Albumin;Serum OSM;Total protein Frataxin Level;GAA repeat-expansion mutation;Serum N-terminal atrial natriuretic peptide (ANP-N);B-type natriuretic peptide (BNP);Oral glucose tolerance;Vitamin E;Lactate;Troponin I;Troponin T;Creatine Kinase;Creatine Kinase-Myocardial Bands (CK-MB);Hemoglobin Electrophoresis;Urine pH;Urine Nitrite;Urine Creatinine;Urine 8-OH-2-deoxyguanosine/creatinine ratio;8-OH-2-deoxyguanosine;8-isoprostanes;Plasma malondialdehyde;Other, specify;Urine White Blood Cells (WBC);Atrial natriuretic peptide (ANP);Glucose;Fasting Glucose;Fasting Insulin;Urea;Creatinine;Amylase;Aspartate Aminotransferase (AST/ASAT/SGOT);Alanine Aminotransferase (ALT/ALAT/SGPT);Gamma-glutamyl transpeptidase (GGT);Lactate Dehydrogenase (LDH);Alkaline Phosphatase;Total Bilirubin;Sodium (Na);Potassium (K);Hemoglobin (HB);Hematocrit (HCT);White Blood Cell Count (WBC);Glycosylated Hemoglobin (HgBA1C);Neutrophil Count;Lymphocyte Count;Monocyte Count;Eosinophil Count;Platelet Count;Prothrombin Time (PT);Iron;Total Iron Binding Capacity(TIBC);Ferritin;Magnesium (Mg);Phosphate (PO4);Calcium (Ca);Ionized Calcium;Bicarbonate (HCO3);International Normalized Ratio (INR);Chloride (Cl);Carbon Dioxide (CO2);Anion Gap;Blood Urea Nitrogen (BUN);Vitamin B12;Total Cholesterol (TCHOL);Low Density Lipoprotein (LDL);High Density Lipoprotein (HDL);Triglycerides (TGs);Very Low Density Lipoprotein (VLDL);Lipoprotein (a) [Lp(a)];Apolipoprotein-I (apo A1);Apolipoprotein B (apo B);apolipoprotein E (apo E);C-Reactive Protein;Albumin;Cortisol;Glucose D-stick;Glucose serum;Partial Thromboplastin Time (PTT);Phenobarb;Phenytoin (Dilantin);Pre-Albumin;Serum OSM;Total protein Alphanumeric

Choose one.

Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org Adult;Pediatric Supplemental 3.00 2013-07-25 08:54:08.2 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

2003746
C01717 Drug screen qualitative result DrgScrnQualReslt Overall result of toxic drug screen Overall result of toxic drug screen Drug screen qualitative result Negative;Positive;Inconclusive;Not available Negative;Positive;Inconclusive;Not available Alphanumeric

No instructions available

Substance Abuse and Mental Health Services Administration drug testing information - http://workplace.samhsa.gov/Dtesting.html Adult;Pediatric Supplemental 3.00 2013-07-20 10:21:25.65 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C01706 Lab test result text LabTestResltTxt Result of the laboratory test Result of the laboratory test Result Alphanumeric

Enter the alphanumeric result

Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org Adult;Pediatric Supplemental 3.00 2013-07-25 08:54:08.2 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 4000

Free-Form Entry

2183364
C01718 Drug screen positive substance type DrgScrnPosSubstncTyp Type of substance(s) found positive in overall toxic drug screen Type of substance(s) found positive in overall toxic drug screen Drug screen screen positive type Cocaine metabolite;Marijuana metabolites;Opiates (codeine and morphine);Phencyclidine;Barbiturates;Benzodiazepines;Methadone;Propoxyphene;Other, specify;Amphetamines Cocaine metabolite;Marijuana metabolites;Opiates (codeine and morphine);Phencyclidine;Barbiturates;Benzodiazepines;Methadone;Propoxyphene;Other, specify;Amphetamines Alphanumeric

Choose all that apply.

Substance Abuse and Mental Health Services Administration drug testing information - http://workplace.samhsa.gov/Dtesting.html Adult;Pediatric Supplemental 3.00 2013-07-20 10:21:25.65 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Multiple Pre-Defined Values Selected

C01707 Lab test abnormality significance type LabTestAbnrmlySignfcnceTyp Indicator as to whether or not the abnormal lab result for the associated test was considered clinically significant for the participant/subject Indicator as to whether or not the abnormal lab result for the associated test was considered clinically significant for the participant/subjec If abnormal, clinically significant? Clinically Significant;Not Clinically Significant Clinically Significant;Not Clinically Significant Alphanumeric

Choose one. If the laboratory test result is abnormal, indicate if the physician considers the result clinically significant.

No references available Adult;Pediatric Supplemental 3.00 2013-07-25 08:54:08.2 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

3179449
C01719 Drug screen sample type DrgScrnSamplTyp Type of sample used to perform the toxic drug screen Type of sample used to perform the toxic drug screen Drug screen sample type Serum;Urine;Hair;Saliva;Other, specify Serum;Urine;Hair;Saliva;Other, specify Alphanumeric

Choose all that apply.

Substance Abuse and Mental Health Services Administration drug testing information - http://workplace.samhsa.gov/Dtesting.html Adult;Pediatric Supplemental 3.00 2013-07-20 10:21:25.65 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Multiple Pre-Defined Values Selected

C01709 Lab test result status LabTestResltStatus Status of the laboratory test result, usually based upon the comparison of the test result to the normal range for the lab test performed Status of the laboratory test result, usually based upon the comparison of the test result to the normal range for the lab test performed Was test result abnormal? Abnormal;Normal;Unknown Abnormal;Normal;Unknown Alphanumeric

Choose one. Indicate if the laboratory test result is abnormal. Abnormal means the test result falls outside the normal range.

No references available Adult;Pediatric Supplemental 3.00 2013-07-25 08:54:08.2 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

2841229v1
C01720 Lab test LOINC code LabTestLOINCCode Identifier name given to a test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested, and any special instructions Identifier name given to a test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested, and any special instruction Alphanumeric

Code the laboratory test with Logical Observation Identifiers Names and Codes (LOINC)

Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org Adult;Pediatric Supplemental 3.00 2013-07-25 08:54:08.2 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 7

Free-Form Entry

C01710 Pregnancy test qualitative result value PregTestQualResltVal Result of the pregnancy test Result of the pregnancy test Pregnancy test qualitative result Positive;Negative Positive;Negative Alphanumeric

Choose one.

Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org Adult;Pediatric Supplemental 3.00 2013-07-25 08:54:08.2 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C18671 Drug screen positive substance other text DrgScrnPosSubstncOTH The free-text field related to 'Drug screen positive substance type' specifying other text. Type of substance(s) found positive in overall toxic drug screen The free-text field related to 'Drug screen positive substance type' specifying other text. Type of substance(s) found positive in overall toxic drug screen Other, specify Alphanumeric

Choose all that apply.

Substance Abuse and Mental Health Services Administration drug testing information - http://workplace.samhsa.gov/Dtesting.html Adult;Pediatric Supplemental 1.00 2014-05-27 13:34:46.0 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 4000

Free-Form Entry

C01711 Lab test result unit of measure LabTestResltUoM Unit of measure for the laboratory test result Unit of measure for the laboratory test result Units for result Alphanumeric

Choose or specify the appropriate response.

Unified Code for Units of Measure (UCUM) - http://unitsofmeasure.org/ Adult;Pediatric Supplemental 3.00 2013-07-25 08:54:08.2 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry

2787947
C18672 Drug screen sample other text DrgScrnSamplOTH The free-text field related to 'Drug screen sample type' specifying other text. Type of sample used to perform the toxic drug screen The free-text field related to 'Drug screen sample type' specifying other text. Type of sample used to perform the toxic drug screen Other, specify Alphanumeric

Choose all that apply.

Substance Abuse and Mental Health Services Administration drug testing information - http://workplace.samhsa.gov/Dtesting.html Adult;Pediatric Supplemental 1.00 2014-05-27 13:34:46.0 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 4000

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C01712 Lab specimen type LabSpecmnTyp Type of specimen collected for the laboratory test Type of specimen collected for the laboratory test Lab specimen type Venous blood - serum;Venous blood - plasma;Venous blood - platelets;Venous blood - buffy coat;Venous blood - whole;Arterial blood - serum;Arterial blood - plasma;Arterial blood - platelets;Arterial blood - buffy coat;Arterial blood - whole;Newborn cord blood;Urine;Cerebral spinal fluid;Buccal swab;Brain tissue;Saliva;Amniotic fluid;Placenta;Other, specify;Blood Venous blood - serum;Venous blood - plasma;Venous blood - platelets;Venous blood - buffy coat;Venous blood - whole;Arterial blood - serum;Arterial blood - plasma;Arterial blood - platelets;Arterial blood - buffy coat;Arterial blood - whole;Newborn cord blood;Urine;Cerebral spinal fluid;Buccal swab;Brain tissue;Saliva;Amniotic fluid;Placenta;Other, specify;Blood Alphanumeric

Choose one

HUPO Plasma Proteome Project specimen collection and handling: Towards the standardization of parameters for plasma proteome samples; Rai, A.J., Proteomics 2005, 5, 3262-3277. Adult;Pediatric Supplemental 3.00 2013-07-20 10:21:25.65 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Single Pre-Defined Value Selected

C18729 Lab panel other text LabPanelOTH The free-text field related to 'Lab panel category' specifying other text. Category or panel of lab tests, often logically grouped according to type of testing (Hematology, Chemistry, Urinalysis) or specimen type (Blood, Urine, CSF) The free-text field related to 'Lab panel category' specifying other text. Category or panel of lab tests, often logically grouped according to type of testing (Hematology, Chemistry, Urinalysis) or specimen type (Blood, Urine, CSF) Other, specify Alphanumeric

Choose one.

Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org Adult;Pediatric Supplemental 1.00 2014-05-27 13:34:46.0 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 4000

Free-Form Entry

3158057
C01701 Lab specimen collection date and time LabSpecmnCollDateTime Date (and time if applicable and known) when the specimen was collected Date (and time if applicable and known) when the specimen was collected Date collected Time collected Date or Date & Time

Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.).

Logical Observation Identifiers Names and Codes (LOINC) - www.loinc.org Adult;Pediatric Supplemental 3.00 2013-07-25 08:54:08.2 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations

Free-Form Entry

2004004
C01713 Lab test result unit of measure UCUM code LabTestResltUoMUCUMCode Unified Code for Units of Measure (UCUM) unit code for the result of the lab test being performed on the specimen Unified Code for Units of Measure (UCUM) unit code for the result of the lab test being performed on the specimen Alphanumeric

Code the lab test result unit of measure using UCUM codes.

Unified Code for Units of Measure (UCUM) - http://unitsofmeasure.org/ Adult;Pediatric Supplemental 3.00 2013-07-25 08:54:08.2 Laboratory Tests Laboratory Tests and Biospecimens/Biomarkers Assessments and Examinations 255

Free-Form Entry

CSV